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  "Title": "Clustering and Model Selection with the Integrated\nClassification Likelihood",
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  "Date": "2025-08-28",
  "Authors@R": "c(person(given = \"Etienne\",\nfamily = \"Côme\",\nrole = c(\"aut\", \"cre\"),\nemail = \"etienne.come@univ-eiffel.fr\"),\nperson(given = \"Nicolas\",\nfamily = \"Jouvin\",\nrole = c(\"aut\")))",
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  "Description": "An ensemble of algorithms that enable the clustering of\nnetworks and data matrices (such as counts, categorical or\ncontinuous) with different type of generative models. Model\nselection and clustering is performed in combination by\noptimizing the Integrated Classification Likelihood (which is\nequivalent to minimizing the description length). Several\nmodels are available such as: Stochastic Block Model, degree\ncorrected Stochastic Block Model, Mixtures of Multinomial,\nLatent Block Model. The optimization is performed thanks to a\ncombination of greedy local search and a genetic algorithm (see\n<arXiv:2002:11577> for more details).",
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      "class": [
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      "fields": [],
      "table": false,
      "tojson": true
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      "class": [
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      "fields": [],
      "table": false,
      "tojson": true
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      "tojson": true
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        "tbl_df",
        "tbl",
        "data.frame"
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      "fields": [
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        "Slow songs or fast songs",
        "Dance",
        "Folk",
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        "Classical music",
        "Musical",
        "Pop",
        "Rock",
        "Metal or Hardrock",
        "Punk",
        "Hiphop, Rap",
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  ],
  "_help": [
    {
      "page": "Alg-class",
      "title": "Abstract optimization algorithm class",
      "topics": [
        "Alg-class"
      ]
    },
    {
      "page": "available_algorithms",
      "title": "Display the list of every currently available optimization algorithm",
      "topics": [
        "available_algorithms"
      ]
    },
    {
      "page": "available_models",
      "title": "Display the list of every currently available DLVM",
      "topics": [
        "available_models"
      ]
    },
    {
      "page": "Books",
      "title": "Books about US politics network dataset",
      "topics": [
        "Books"
      ]
    },
    {
      "page": "clustering",
      "title": "Method to extract the clustering results from an 'IclFit-class' object",
      "topics": [
        "clustering",
        "clustering,IclFit-method"
      ]
    },
    {
      "page": "coef-DcLbmFit-method",
      "title": "Extract parameters from an 'DcLbmFit-class' object",
      "topics": [
        "coef,DcLbmFit-method"
      ]
    },
    {
      "page": "coef-DcSbmFit-method",
      "title": "Extract parameters from an 'DcSbmFit-class' object",
      "topics": [
        "coef,DcSbmFit-method"
      ]
    },
    {
      "page": "coef-DiagGmmFit-method",
      "title": "Extract mixture parameters from 'DiagGmmFit-class' object",
      "topics": [
        "coef,DiagGmmFit-method"
      ]
    },
    {
      "page": "coef-GmmFit-method",
      "title": "Extract mixture parameters from 'GmmFit-class' object",
      "topics": [
        "coef,GmmFit-method"
      ]
    },
    {
      "page": "coef-IclFit-method",
      "title": "Extract parameters from an 'IclFit-class' object",
      "topics": [
        "coef,IclFit-method"
      ]
    },
    {
      "page": "coef-LcaFit-method",
      "title": "Extract parameters from an 'LcaFit-class' object",
      "topics": [
        "coef,LcaFit-method"
      ]
    },
    {
      "page": "coef-MoMFit-method",
      "title": "Extract parameters from an 'MoMFit-class' object",
      "topics": [
        "coef,MoMFit-method"
      ]
    },
    {
      "page": "coef-MoRFit-method",
      "title": "Extract mixture parameters from 'MoRFit-class' object using MAP estimation",
      "topics": [
        "coef,MoRFit-method"
      ]
    },
    {
      "page": "coef-MultSbmFit-method",
      "title": "Extract parameters from an 'MultSbmFit-class' object",
      "topics": [
        "coef,MultSbmFit-method"
      ]
    },
    {
      "page": "coef-SbmFit-method",
      "title": "Extract parameters from an 'SbmFit-class' object",
      "topics": [
        "coef,SbmFit-method"
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    },
    {
      "page": "CombinedModels",
      "title": "Combined Models classes",
      "concept": [
        "DlvmModels"
      ],
      "topics": [
        "CombinedModels",
        "CombinedModels-class"
      ]
    },
    {
      "page": "CombinedModelsFit-class",
      "title": "Combined Models fit results class",
      "topics": [
        "CombinedModelsFit-class"
      ]
    },
    {
      "page": "CombinedModelsPath-class",
      "title": "Combined Models hierarchical fit results class",
      "topics": [
        "CombinedModelsPath-class"
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    },
    {
      "page": "cut-DcLbmPath-method",
      "title": "Method to cut a DcLbmPath solution to a desired number of cluster",
      "topics": [
        "cut,DcLbmPath-method"
      ]
    },
    {
      "page": "cut-IclPath-method",
      "title": "Generic method to cut a path solution to a desired number of cluster",
      "topics": [
        "cut,IclPath-method"
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    },
    {
      "page": "DcLbm",
      "title": "Degree Corrected Latent Block Model for bipartite graph class",
      "concept": [
        "DlvmModels"
      ],
      "topics": [
        "DcLbm",
        "DcLbm-class",
        "DcLbmPrior",
        "DcLbmPrior-class"
      ]
    },
    {
      "page": "DcLbmFit-class",
      "title": "Degree corrected Latent Block Model fit results class",
      "topics": [
        "DcLbmFit-class"
      ]
    },
    {
      "page": "DcLbmPath-class",
      "title": "Degree corrected Latent Block Model hierarchical fit results class",
      "topics": [
        "DcLbmPath-class"
      ]
    },
    {
      "page": "DcSbm",
      "title": "Degree Corrected Stochastic Block Model Prior class",
      "concept": [
        "DlvmModels"
      ],
      "topics": [
        "DcSbm",
        "DcSbm-class",
        "DcSbmPrior",
        "DcSbmPrior-class"
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    },
    {
      "page": "DcSbmFit-class",
      "title": "Degree Corrected Stochastic Block Model fit results class",
      "topics": [
        "DcSbmFit-class"
      ]
    },
    {
      "page": "DcSbmPath-class",
      "title": "Degree Corrected Stochastic Block Model hierarchical fit results class",
      "topics": [
        "DcSbmPath-class"
      ]
    },
    {
      "page": "DiagGmm",
      "title": "Diagonal Gaussian Mixture Model Prior description class",
      "concept": [
        "DlvmModels"
      ],
      "topics": [
        "DiagGmm",
        "DiagGmm-class",
        "DiagGmmPrior",
        "DiagGmmPrior-class"
      ]
    },
    {
      "page": "DiagGmmFit-class",
      "title": "Diagonal Gaussian mixture model fit results class",
      "topics": [
        "DiagGmmFit-class"
      ]
    },
    {
      "page": "DiagGmmPath-class",
      "title": "Diagonal Gaussian mixture model hierarchical fit results class",
      "topics": [
        "DiagGmmPath-class"
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    },
    {
      "page": "DlvmCoPrior-class",
      "title": "Abstract class to represent a generative model for co-clustering",
      "concept": [
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      ],
      "topics": [
        "DlvmCoPrior-class"
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    },
    {
      "page": "DlvmPrior-class",
      "title": "Abstract class to represent a generative model for clustering",
      "concept": [
        "DlvmModels"
      ],
      "topics": [
        "DlvmPrior-class"
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    },
    {
      "page": "extractSubModel",
      "title": "Extract a part of a 'CombinedModelsPath-class' object",
      "topics": [
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        "extractSubModel,CombinedModelsPath,character-method"
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    },
    {
      "page": "fashion",
      "title": "Fashion mnist dataset",
      "topics": [
        "fashion"
      ]
    },
    {
      "page": "Fifa",
      "title": "Fifa data",
      "topics": [
        "Fifa"
      ]
    },
    {
      "page": "Football",
      "title": "American College football network dataset",
      "topics": [
        "Football"
      ]
    },
    {
      "page": "Genetic-class",
      "title": "Genetic optimization algorithm",
      "topics": [
        "Genetic",
        "Genetic-class"
      ]
    },
    {
      "page": "Gmm",
      "title": "Gaussian Mixture Model Prior description class",
      "concept": [
        "DlvmModels"
      ],
      "topics": [
        "Gmm",
        "Gmm-class",
        "GmmPrior",
        "GmmPrior-class"
      ]
    },
    {
      "page": "GmmFit-class",
      "title": "Gaussian mixture model fit results class",
      "topics": [
        "GmmFit-class"
      ]
    },
    {
      "page": "gmmpairs",
      "title": "Make a matrix of plots with a given data and gmm fitted parameters",
      "topics": [
        "gmmpairs"
      ]
    },
    {
      "page": "GmmPath-class",
      "title": "Gaussian mixture model hierarchical fit results class",
      "topics": [
        "GmmPath-class"
      ]
    },
    {
      "page": "greed",
      "title": "Model based hierarchical clustering",
      "concept": [
        "DlvmModels"
      ],
      "topics": [
        "greed-package",
        "greed"
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    },
    {
      "page": "H",
      "title": "Compute the entropy of a discrete sample",
      "topics": [
        "H"
      ]
    },
    {
      "page": "Hybrid-class",
      "title": "Hybrid optimization algorithm",
      "topics": [
        "Hybrid",
        "Hybrid-class"
      ]
    },
    {
      "page": "ICL",
      "title": "Generic method to extract the ICL value from an 'IclFit-class' object",
      "topics": [
        "ICL",
        "ICL,IclFit-method"
      ]
    },
    {
      "page": "IclFit-class",
      "title": "Abstract class to represent a clustering result",
      "topics": [
        "IclFit-class"
      ]
    },
    {
      "page": "IclPath-class",
      "title": "Abstract class to represent a hierarchical clustering result",
      "topics": [
        "IclPath-class"
      ]
    },
    {
      "page": "Jazz",
      "title": "Jazz musicians network dataset",
      "topics": [
        "Jazz"
      ]
    },
    {
      "page": "K",
      "title": "Generic method to get the number of clusters from an 'IclFit-class' object",
      "topics": [
        "K",
        "K,IclFit-method"
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    },
    {
      "page": "Lca",
      "title": "Latent Class Analysis Model Prior class",
      "concept": [
        "DlvmModels"
      ],
      "topics": [
        "Lca",
        "Lca-class",
        "LcaPrior",
        "LcaPrior-class"
      ]
    },
    {
      "page": "LcaFit-class",
      "title": "Latent Class Analysis fit results class",
      "topics": [
        "LcaFit-class"
      ]
    },
    {
      "page": "LcaPath-class",
      "title": "Latent Class Analysis hierarchical fit results class",
      "topics": [
        "LcaPath-class"
      ]
    },
    {
      "page": "MI",
      "title": "Compute the mutual information of two discrete samples",
      "topics": [
        "MI"
      ]
    },
    {
      "page": "MoM",
      "title": "Mixture of Multinomial Model Prior description class",
      "concept": [
        "DlvmModels"
      ],
      "topics": [
        "MoM",
        "MoM-class",
        "MoMPrior",
        "MoMPrior-class"
      ]
    },
    {
      "page": "MoMFit-class",
      "title": "Mixture of Multinomial fit results class",
      "topics": [
        "MoMFit-class"
      ]
    },
    {
      "page": "MoMPath-class",
      "title": "Mixture of Multinomial hierarchical fit results class",
      "topics": [
        "MoMPath-class"
      ]
    },
    {
      "page": "MoR",
      "title": "Multivariate mixture of regression Prior model description class",
      "concept": [
        "DlvmModels"
      ],
      "topics": [
        "MoR",
        "MoR-class",
        "MoRPrior",
        "MoRPrior-class"
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    },
    {
      "page": "MoRFit-class",
      "title": "Clustering with a multivariate mixture of regression model fit results class",
      "topics": [
        "MoRFit-class"
      ]
    },
    {
      "page": "MoRPath-class",
      "title": "Multivariate mixture of regression model hierarchical fit results class",
      "topics": [
        "MoRPath-class"
      ]
    },
    {
      "page": "Multistarts-class",
      "title": "Greedy algorithm with multiple start class",
      "topics": [
        "Multistarts",
        "Multistarts-class"
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    },
    {
      "page": "MultSbm",
      "title": "Multinomial Stochastic Block Model Prior class",
      "concept": [
        "DlvmModels"
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      "topics": [
        "MultSbm",
        "MultSbm-class",
        "MultSbmPrior",
        "MultSbmPrior-class"
      ]
    },
    {
      "page": "MultSbmFit-class",
      "title": "Multinomial Stochastic Block Model fit results class",
      "topics": [
        "MultSbmFit-class"
      ]
    },
    {
      "page": "MultSbmPath-class",
      "title": "Multinomial Stochastic Block Model hierarchical fit results class",
      "topics": [
        "MultSbmPath-class"
      ]
    },
    {
      "page": "mushroom",
      "title": "Mushroom data",
      "topics": [
        "mushroom"
      ]
    },
    {
      "page": "Ndrangheta",
      "title": "Ndrangheta mafia covert network dataset",
      "topics": [
        "Ndrangheta"
      ]
    },
    {
      "page": "NewGuinea",
      "title": "NewGuinea data",
      "topics": [
        "NewGuinea"
      ]
    },
    {
      "page": "NMI",
      "title": "Compute the normalized mutual information of two discrete samples",
      "topics": [
        "NMI"
      ]
    },
    {
      "page": "plot-DcLbmFit-missing-method",
      "title": "Plot a 'DcLbmFit-class'",
      "topics": [
        "plot,DcLbmFit,missing-method"
      ]
    },
    {
      "page": "plot-DcLbmPath-missing-method",
      "title": "Plot a 'DcLbmPath-class'",
      "topics": [
        "plot,DcLbmPath,missing-method"
      ]
    },
    {
      "page": "plot-DcSbmFit-missing-method",
      "title": "Plot a 'DcSbmFit-class' object",
      "topics": [
        "plot,DcSbmFit,missing-method"
      ]
    },
    {
      "page": "plot-DiagGmmFit-missing-method",
      "title": "Plot a 'DiagGmmFit-class' object",
      "topics": [
        "plot,DiagGmmFit,missing-method"
      ]
    },
    {
      "page": "plot-GmmFit-missing-method",
      "title": "Plot a 'GmmFit-class' object",
      "topics": [
        "plot,GmmFit,missing-method"
      ]
    },
    {
      "page": "plot-IclPath-missing-method",
      "title": "Plot an 'IclPath-class' object",
      "topics": [
        "plot,IclPath,missing-method"
      ]
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